Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015684.1 Corchorus olitorius cultivar O-4 contig15717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50082

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3208--3258
17
3.1
16
86
8
66
35
21
21
21
1.96
7347--7498
75
2.0
75
100
0
304
38
18
7
35
1.80
7706--7767
30
2.1
30
93
0
106
24
20
4
50
1.68
8195--8228
17
2.1
17
94
5
61
47
0
0
52
1.00
11941--11991
20
2.5
20
90
9
86
37
21
13
27
1.91
12016--12066
14
3.4
14
71
23
50
39
23
11
25
1.89
12010--12089
31
2.5
31
91
4
124
41
18
11
28
1.85
12088--12188
31
3.1
31
68
18
80
42
20
9
26
1.83
11995--12140
78
1.9
78
89
1
229
39
19
13
27
1.89
12100--12170
35
2.0
35
83
0
88
40
19
12
26
1.88
13817--13879
25
2.5
26
87
7
87
4
12
23
58
1.53
20861--20921
30
2.0
30
96
0
113
26
24
3
45
1.68
37815--37848
17
1.9
18
88
5
52
0
17
0
82
0.67
38668--38701
16
2.1
17
88
5
52
5
8
8
76
1.15

Tables:   1

The End!