Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015689.1 Corchorus olitorius cultivar O-4 contig15722, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10243

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1729--1779
27
2.0
27
85
14
74
50
3
1
43
1.31
1928--2113
22
8.6
21
75
11
128
34
15
10
39
1.81
1928--2031
43
2.4
44
84
7
133
38
15
10
35
1.82
1928--2138
22
9.7
22
75
9
110
33
15
9
40
1.81
6859--6892
12
2.7
13
90
4
52
58
11
0
29
1.33
7423--7496
28
2.6
28
100
0
148
33
12
22
31
1.91

Tables:   1

The End!