Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015695.1 Corchorus olitorius cultivar O-4 contig15728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58776

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2293--2353
30
2.0
30
100
0
122
36
16
16
31
1.91
2988--3014
10
2.7
10
100
0
54
11
11
0
77
0.99
3445--3483
5
7.8
5
82
0
51
61
0
35
2
1.10
5826--5853
13
2.2
13
100
0
56
46
0
25
28
1.53
14470--14541
31
2.3
31
77
13
85
23
5
9
61
1.48
14781--14852
37
1.9
38
81
13
87
43
2
2
51
1.30
14994--15031
15
2.4
16
91
4
60
42
44
10
2
1.52
21278--21365
45
2.0
43
86
6
124
42
21
4
31
1.73
28693--28733
17
2.4
16
88
8
55
70
0
4
24
1.06
53244--53445
108
1.9
105
87
9
299
23
25
5
45
1.74

Tables:   1

The End!