Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015696.1 Corchorus olitorius cultivar O-4 contig15729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3404

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75--138
29
2.2
29
91
0
101
34
26
7
31
1.85
1302--1330
15
1.9
15
100
0
58
20
13
24
41
1.89
1451--1492
18
2.3
18
88
8
59
52
4
0
42
1.22
1475--1525
24
2.1
24
85
7
68
50
0
7
41
1.31
1412--1894
241
2.0
241
99
0
957
45
4
9
40
1.56
1716--1766
24
2.1
24
85
7
68
50
0
7
41
1.31
3193--3315
22
5.6
22
76
1
104
37
17
9
35
1.82
3234--3317
44
1.9
44
90
0
132
35
14
10
39
1.81
3233--3330
22
4.5
22
82
0
115
37
14
9
38
1.78
3233--3402
44
3.9
42
73
14
123
41
15
9
32
1.80

Tables:   1

The End!