Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015698.1 Corchorus olitorius cultivar O-4 contig15731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9436

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
970--1004
15
2.3
15
90
0
52
34
0
14
51
1.42
2044--2084
18
2.3
18
86
0
55
21
31
36
9
1.86
4178--4213
17
2.1
17
89
0
54
30
11
19
38
1.86
6778--6846
18
3.8
18
70
0
57
20
27
24
27
1.99
8619--8653
17
2.1
17
88
0
52
28
11
20
40
1.87

Tables:   1

The End!