Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015703.1 Corchorus olitorius cultivar O-4 contig15736, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6302

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
923--959
15
2.5
15
90
0
56
18
27
13
40
1.88
1783--1917
48
2.9
47
82
9
159
49
6
14
28
1.69
3202--3239
9
4.3
9
90
3
60
31
23
0
44
1.54
3202--3239
18
2.2
17
95
4
67
31
23
0
44
1.54
3951--4034
32
2.6
32
83
3
98
52
30
10
5
1.60
3950--4035
16
5.4
16
69
5
57
51
31
11
5
1.62
4250--4342
16
5.8
16
64
5
53
37
34
10
17
1.84
4238--4340
32
3.2
31
87
5
143
37
33
11
16
1.85

Tables:   1

The End!