Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015717.1 Corchorus olitorius cultivar O-4 contig15750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41136

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9278--9353
38
2.0
38
100
0
152
26
18
28
26
1.98
9971--10056
24
3.6
24
90
6
147
10
24
23
41
1.85
11835--11867
15
2.2
15
100
0
66
45
9
0
45
1.35
15622--15662
19
2.2
19
95
0
73
46
4
31
17
1.69
19753--20321
283
2.0
285
97
1
1070
24
20
10
44
1.83
27096--27136
1
41.0
1
85
0
55
0
0
7
92
0.38
27096--27136
17
2.6
16
92
7
66
0
0
7
92
0.38
37326--37364
2
19.5
2
100
0
78
51
0
0
48
1.00
37438--37469
13
2.5
13
94
0
55
12
50
6
31
1.65
38965--39381
231
1.8
231
87
1
629
37
16
14
31
1.89

Tables:   1

The End!