Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015718.1 Corchorus olitorius cultivar O-4 contig15751, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31697

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
544--594
18
2.8
18
93
0
84
17
25
31
25
1.97
7365--7555
68
3.0
63
76
11
170
38
9
19
32
1.85
11668--11694
2
13.5
2
100
0
54
48
0
0
51
1.00
17242--17392
65
2.3
65
91
0
248
30
11
23
35
1.90
23432--23518
42
2.1
42
97
0
165
36
22
22
17
1.94
23474--23869
212
1.9
211
91
0
648
44
15
18
20
1.86
24365--24393
14
2.1
14
100
0
58
34
13
6
44
1.71
29452--29504
27
2.0
27
81
7
63
28
11
11
49
1.73
31242--31485
31
7.8
31
88
0
290
35
24
22
18
1.96

Tables:   1

The End!