Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015719.1 Corchorus olitorius cultivar O-4 contig15752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39862

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3763--3929
62
2.7
62
84
0
174
16
23
25
33
1.96
3788--3943
31
5.1
31
84
1
170
16
24
27
32
1.96
3789--3943
61
2.5
62
86
1
204
16
24
27
32
1.96
16050--16098
17
2.9
16
85
8
62
22
20
22
34
1.97
16537--16587
21
2.4
21
90
0
84
21
5
39
33
1.78
16652--16709
21
2.8
21
89
0
89
18
20
34
25
1.96
16715--16790
30
2.5
30
95
0
134
26
2
43
27
1.68
22451--22482
16
2.0
16
93
0
55
62
18
3
15
1.45
29060--29125
30
2.2
30
91
8
107
45
16
13
24
1.84
31193--31228
7
5.3
7
93
6
65
38
44
0
16
1.48
31193--31228
13
2.6
14
95
4
65
38
44
0
16
1.48
37134--37301
81
2.1
81
94
0
291
26
14
11
47
1.79
38619--38695
33
2.4
33
84
2
93
36
19
22
22
1.95

Tables:   1

The End!