Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015728.1 Corchorus olitorius cultivar O-4 contig15761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74023

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9501--9587
3
29.0
3
75
9
52
40
2
3
54
1.30
9499--9570
30
2.4
30
88
0
108
38
4
4
52
1.40
9499--9587
30
3.0
29
85
3
106
40
3
3
52
1.34
11440--11490
25
1.9
27
88
11
79
43
1
13
41
1.55
12720--13264
272
2.0
273
95
0
993
44
11
19
25
1.83
16933--16964
2
16.0
2
100
0
64
50
0
0
50
1.00
17484--17593
53
2.1
53
94
0
193
24
8
16
50
1.72
28460--28484
2
12.5
2
100
0
50
52
48
0
0
1.00
30294--30346
27
2.0
27
96
0
97
35
24
5
33
1.79
33157--33200
23
1.9
23
100
0
88
38
18
13
29
1.89
35047--35086
21
2.0
20
85
9
55
52
7
2
37
1.43
49253--49284
12
2.7
12
95
0
55
56
6
28
9
1.55
50232--50296
32
2.0
32
88
5
96
23
24
15
36
1.93
61557--61596
21
1.9
21
100
0
80
32
25
5
37
1.77
65482--65512
16
1.9
16
93
0
53
41
0
3
54
1.16

Tables:   1

The End!