Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015736.1 Corchorus olitorius cultivar O-4 contig15769, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24629

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1077--1125
14
3.4
14
73
15
55
57
10
4
28
1.50
1073--1131
29
2.0
29
100
0
118
52
13
3
30
1.57
1073--1118
15
3.1
15
70
17
51
52
15
2
30
1.55
1458--1524
34
2.0
34
81
0
80
40
10
7
41
1.67
3626--3778
75
2.0
75
89
0
234
35
13
30
21
1.91
4183--4236
25
2.2
25
96
0
99
38
33
20
7
1.80
13512--13628
60
2.0
60
87
3
173
34
6
26
32
1.83
13530--13666
60
2.3
58
81
11
134
35
6
24
32
1.82
17268--17293
3
8.7
3
100
0
52
0
34
0
65
0.93
19898--19933
2
18.0
2
100
0
72
50
0
0
50
1.00
20595--20635
7
5.9
7
100
0
82
87
0
12
0
0.53

Tables:   1

The End!