Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015758.1 Corchorus olitorius cultivar O-4 contig15791, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5046

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--56
16
3.2
16
80
5
59
56
0
0
43
0.99
6--123
18
6.8
18
67
24
60
51
1
0
46
1.11
87--120
12
2.8
12
87
12
52
50
0
0
50
1.00
163--197
18
1.9
18
94
0
61
28
8
11
51
1.67
291--361
35
2.0
35
84
10
92
42
26
15
15
1.87
866--917
19
2.7
19
100
0
104
25
28
21
25
1.99
2627--2677
17
3.1
16
86
8
66
21
21
21
35
1.96
3249--3350
42
2.4
42
96
0
186
18
13
41
26
1.88

Tables:   1

The End!