Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015768.1 Corchorus olitorius cultivar O-4 contig15801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14524

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--151
45
2.2
43
86
7
129
37
21
6
35
1.79
1118--1207
42
2.2
42
91
2
146
34
4
20
41
1.72
1315--1371
27
2.1
27
90
0
87
38
22
3
35
1.72
7239--7936
350
2.0
350
95
0
1272
33
20
15
30
1.93
9351--9378
14
2.0
14
100
0
56
35
7
14
42
1.73
9375--9401
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!