Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015774.1 Corchorus olitorius cultivar O-4 contig15807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20768

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
527--632
6
17.5
6
89
8
119
78
0
21
0
0.75
527--669
12
11.7
11
76
19
90
78
0
18
3
0.89
600--665
22
3.0
21
80
8
69
83
0
9
7
0.82
1988--2044
12
4.8
11
73
14
51
35
1
10
52
1.46
3628--3661
16
2.1
16
94
0
59
29
5
29
35
1.81
5110--5573
163
2.8
164
89
3
693
35
10
9
44
1.72
5601--5960
142
2.6
142
85
2
476
32
10
10
46
1.74
5803--6121
170
1.9
171
86
3
464
36
12
7
43
1.70
6630--6666
18
2.0
20
89
10
60
35
2
8
54
1.44
7791--7854
2
30.0
2
82
17
76
45
0
7
46
1.32
10929--10977
22
2.2
23
89
7
75
18
8
28
44
1.78
12300--12347
25
2.0
25
88
8
73
10
39
14
35
1.80
18542--18582
17
2.4
17
87
0
55
36
0
4
58
1.20
18551--18583
17
1.9
17
93
0
57
39
0
0
60
0.97

Tables:   1

The End!