Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015776.1 Corchorus olitorius cultivar O-4 contig15809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23375

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7090--7396
153
2.0
153
100
0
614
31
15
14
38
1.88
11096--11229
46
3.0
46
86
4
195
43
6
15
34
1.73
13766--13838
31
2.4
30
75
9
76
24
2
12
60
1.45
13802--13850
24
2.2
21
82
10
53
30
0
10
59
1.31
14080--14126
25
2.0
23
84
16
60
38
0
4
57
1.18
14319--14351
16
2.1
16
100
0
66
36
33
18
12
1.88
14786--14832
23
2.0
23
91
0
76
12
4
42
40
1.63
17641--17731
39
2.3
39
100
0
182
29
7
21
40
1.81
18733--18775
22
1.9
23
85
4
61
46
4
4
44
1.45
21014--21303
148
2.0
146
84
4
377
27
19
17
35
1.94
22311--22423
21
5.4
21
91
2
158
28
18
26
26
1.98

Tables:   1

The End!