Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015781.1 Corchorus olitorius cultivar O-4 contig15814, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14009

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5555--5594
12
3.3
12
89
6
55
62
2
27
7
1.35
6747--7705
141
6.8
141
91
0
1492
30
20
16
33
1.94
6946--7004
22
2.5
23
78
10
66
28
23
16
30
1.97
7753--7900
39
3.8
39
81
6
167
25
18
15
41
1.89
7753--7906
79
2.0
78
83
8
197
25
17
16
40
1.90
9138--9423
142
2.0
142
97
0
536
37
22
8
31
1.85

Tables:   1

The End!