Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015790.1 Corchorus olitorius cultivar O-4 contig15823, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3697

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185--314
22
5.9
22
74
7
93
38
13
16
30
1.88
185--309
44
2.8
44
82
0
142
39
14
14
32
1.86
335--405
22
3.2
23
80
7
85
36
7
21
35
1.80
540--661
22
5.5
22
79
2
120
31
13
17
36
1.89
470--662
44
4.3
43
72
12
133
31
11
17
39
1.85

Tables:   1

The End!