Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015793.1 Corchorus olitorius cultivar O-4 contig15826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6904

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
693--764
29
2.5
28
79
6
81
31
13
23
30
1.94
1549--1599
26
2.0
25
92
3
84
45
9
1
43
1.48
4020--4072
22
2.4
22
87
0
70
28
15
7
49
1.71
4204--4472
65
4.1
66
70
17
202
40
12
14
32
1.83
4255--4538
133
2.1
133
95
0
514
39
11
17
32
1.85
4310--4519
68
3.1
67
73
16
236
39
12
17
31
1.86
6695--6781
3
29.3
3
97
2
167
33
0
0
66
0.92

Tables:   1

The End!