Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015794.1 Corchorus olitorius cultivar O-4 contig15827, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18024

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--496
12
2.1
12
100
0
50
32
0
20
48
1.50
504--1077
211
2.7
211
96
0
1040
35
21
7
35
1.82
3573--3695
59
2.1
59
92
0
201
26
7
21
45
1.77
3790--3842
21
2.5
21
81
0
61
32
0
26
41
1.56
3907--3954
21
2.3
20
82
13
53
29
2
25
43
1.66
4131--4188
21
2.8
20
84
10
64
31
1
24
43
1.64
8685--8780
47
2.0
47
94
4
167
41
8
21
28
1.82
8771--8800
14
2.1
14
100
0
60
40
26
13
20
1.89
9482--9535
26
2.1
26
96
0
99
46
5
18
29
1.72
14727--14751
7
3.6
7
100
0
50
88
0
0
12
0.53

Tables:   1

The End!