Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015795.1 Corchorus olitorius cultivar O-4 contig15828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41386

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4100--4135
15
2.3
15
95
4
63
16
2
0
80
0.83
11216--11257
21
2.1
20
82
8
50
80
2
2
14
0.90
17560--17615
27
2.1
27
90
6
87
21
10
3
64
1.40
21318--21359
2
21.0
2
90
0
66
45
0
4
50
1.23
22268--22312
22
2.0
22
95
0
81
37
31
13
17
1.89
23686--23755
29
2.4
30
88
7
99
20
11
25
42
1.85
30617--30684
2
34.5
2
85
8
86
45
2
1
50
1.26
30605--30680
37
2.1
37
97
0
143
42
5
2
50
1.39
31311--31344
17
2.1
17
88
5
52
52
2
0
44
1.16
35070--35108
18
2.2
18
100
0
78
66
5
17
10
1.39

Tables:   1

The End!