Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015801.1 Corchorus olitorius cultivar O-4 contig15834, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9537

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2005--2063
30
2.0
30
96
0
109
42
3
25
28
1.71
2133--2194
31
2.0
31
96
0
115
30
25
17
25
1.97
8448--8505
18
3.3
18
74
13
66
18
10
15
55
1.68
8430--8505
35
2.2
35
95
0
134
19
9
17
53
1.70
8431--8490
17
3.5
17
76
13
68
23
8
18
50
1.74
8489--8545
14
4.0
13
72
18
51
12
10
14
63
1.53
8990--9116
45
2.8
45
88
3
202
39
21
5
33
1.76

Tables:   1

The End!