Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015802.1 Corchorus olitorius cultivar O-4 contig15835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11722

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3111--3135
13
1.9
13
100
0
50
64
12
16
8
1.49
3118--3174
15
4.0
15
68
13
57
63
14
12
10
1.53
3059--3210
64
2.4
63
86
5
202
59
15
13
12
1.62
3153--3256
22
4.4
23
70
14
79
55
17
11
15
1.68
3155--3427
71
3.8
72
83
13
380
56
17
10
15
1.67
3154--3457
146
2.1
148
94
2
542
55
18
11
14
1.69
3300--3413
22
4.9
22
70
13
77
57
18
10
14
1.65
6230--6285
28
2.0
29
96
3
105
55
10
14
19
1.68
6322--6346
13
1.9
13
100
0
50
48
20
8
24
1.76
8110--8134
7
3.6
7
100
0
50
16
0
52
32
1.44

Tables:   1

The End!