Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015804.1 Corchorus olitorius cultivar O-4 contig15837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18645

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2465--2508
20
2.2
20
87
0
61
25
9
11
54
1.65
3803--3853
17
3.1
16
86
8
66
23
21
19
35
1.96
5628--5683
26
2.2
26
87
3
78
39
14
16
30
1.88
12460--12531
31
2.3
31
75
13
76
26
4
8
61
1.43
12916--12953
12
3.2
12
85
7
51
18
50
26
5
1.68
13373--13419
20
2.3
20
96
0
85
44
12
4
38
1.62
15446--15480
13
2.7
13
90
0
52
20
31
8
40
1.82
17213--17487
152
1.8
151
94
0
487
51
3
8
37
1.48
18377--18443
35
1.9
35
82
14
86
53
2
2
40
1.31

Tables:   1

The End!