Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015805.1 Corchorus olitorius cultivar O-4 contig15838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24885

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
966--1236
136
2.0
135
98
0
524
28
11
19
40
1.87
1462--1506
21
2.1
22
87
4
65
33
33
2
31
1.70
3132--3400
53
5.1
53
93
0
466
23
7
17
52
1.69
3987--4042
27
2.1
27
86
0
76
12
32
7
48
1.68
17860--17904
15
3.0
14
81
12
54
0
28
11
60
1.31
22090--22129
15
2.6
16
88
4
55
15
10
12
62
1.54

Tables:   1

The End!