Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015808.1 Corchorus olitorius cultivar O-4 contig15841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29036

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3501--3701
105
1.9
103
87
4
294
42
8
8
40
1.67
6338--6368
15
2.1
15
93
0
53
51
0
0
48
1.00
6341--6391
19
2.7
18
82
8
66
45
0
1
52
1.12
7742--7843
51
2.0
50
81
12
120
22
21
13
42
1.88
9468--9522
6
9.2
6
73
15
51
5
0
16
78
0.93
9493--9521
8
3.8
8
95
4
51
0
0
20
79
0.74
14909--14957
13
3.6
13
78
15
55
77
4
18
0
0.92
14918--14959
16
2.4
17
80
15
50
78
4
16
0
0.91
17861--17934
30
2.5
31
84
10
77
50
4
9
36
1.54
17872--17939
30
2.4
28
85
9
100
48
2
8
39
1.49
19668--19718
25
2.1
25
89
7
79
35
13
7
43
1.73

Tables:   1

The End!