Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015814.1 Corchorus olitorius cultivar O-4 contig15847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6713

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1976--2001
2
13.0
2
100
0
52
50
0
0
50
1.00
1922--2049
51
2.6
51
93
3
217
52
8
1
37
1.42
4099--4135
2
18.5
2
100
0
74
51
0
0
48
1.00
4848--4899
14
3.6
14
82
5
59
32
0
15
51
1.43
5059--5120
31
2.0
31
96
0
115
30
22
4
41
1.74
5309--5351
22
2.0
21
81
4
50
30
11
0
58
1.34
5156--5416
92
2.8
93
93
1
443
33
13
1
52
1.47

Tables:   1

The End!