Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015820.1 Corchorus olitorius cultivar O-4 contig15853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15471

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--124
21
3.0
24
71
26
62
54
6
6
31
1.54
2762--2793
16
2.0
16
93
0
55
40
0
0
59
0.97
4604--4678
32
2.3
32
97
0
141
29
21
8
41
1.81
8623--8710
31
2.8
30
84
3
95
40
15
14
28
1.87
8793--8865
29
2.6
29
93
2
121
13
16
12
57
1.65
9362--9399
15
2.4
17
83
16
55
39
0
2
57
1.12
9728--11050
334
4.0
329
79
8
1272
33
15
14
36
1.88
12697--12790
45
2.2
43
88
7
138
38
22
4
35
1.74
13602--13723
13
9.9
13
67
19
50
54
0
2
41
1.19
13598--13716
5
23.6
5
69
19
70
54
0
2
42
1.19
13598--13723
8
15.9
8
76
19
79
54
0
2
42
1.19
13650--13723
16
4.6
16
88
5
96
55
0
0
44
0.99
13650--13723
24
3.1
24
88
3
105
55
0
0
44
0.99

Tables:   1

The End!