Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015824.1 Corchorus olitorius cultivar O-4 contig15857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58706

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7599--7670
29
2.4
30
76
17
78
27
25
11
36
1.90
7970--8040
29
2.4
29
79
9
72
29
14
28
28
1.95
12566--12610
13
3.5
13
84
6
56
0
4
8
86
0.69
12567--12599
8
4.2
8
96
3
59
0
0
9
90
0.44
19879--19903
11
2.3
11
100
0
50
32
16
0
52
1.44
24533--24577
18
2.5
18
85
0
54
8
20
40
31
1.83
30710--30740
2
15.5
2
93
0
53
48
3
0
48
1.17
36148--36190
13
3.2
13
74
6
50
67
4
18
9
1.36
36188--36215
13
2.2
13
100
0
56
78
0
21
0
0.75
41643--41753
54
2.1
54
86
3
152
18
18
25
36
1.94
45329--45383
17
3.2
17
84
0
65
36
16
21
25
1.94
52562--52606
6
7.3
6
80
14
56
31
31
2
35
1.70
54731--54756
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!