Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015832.1 Corchorus olitorius cultivar O-4 contig15865, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27819

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1035--1670
334
1.9
333
81
3
778
34
16
15
33
1.90
2629--2697
8
9.1
8
76
23
78
52
0
23
24
1.48
2632--2690
5
13.4
5
74
25
62
54
0
22
23
1.45
2640--2697
13
4.1
13
80
20
71
53
0
22
24
1.46
2625--2697
21
3.5
21
92
7
114
52
0
23
24
1.48
4030--4060
1
31.0
1
100
0
62
0
0
0
100
0.00
8200--8261
20
3.0
21
71
15
67
43
1
8
46
1.42
8390--8537
22
6.8
22
72
13
101
39
14
8
37
1.75
8389--8493
43
2.4
44
78
13
119
39
14
8
38
1.77
13079--13117
20
2.0
19
90
5
60
48
0
2
48
1.15
18335--18411
33
2.4
33
84
2
93
36
19
22
22
1.95

Tables:   1

The End!