Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015841.1 Corchorus olitorius cultivar O-4 contig15874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31172

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
306--394
31
3.0
30
78
15
96
22
23
15
38
1.93
441--1381
490
1.9
490
98
0
1819
29
16
18
35
1.93
1574--1602
15
1.9
15
100
0
58
44
20
6
27
1.77
1985--2020
17
2.1
18
89
5
56
5
13
0
80
0.88
4105--4144
20
2.0
20
95
4
73
17
10
5
67
1.37
5754--6203
224
2.0
226
97
0
859
30
10
21
37
1.88
8398--8436
20
2.0
20
90
10
62
48
2
0
48
1.15
9148--9215
33
2.1
33
97
0
127
44
5
17
32
1.73
24843--24876
6
5.7
6
92
0
59
50
17
2
29
1.61

Tables:   1

The End!