Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015844.1 Corchorus olitorius cultivar O-4 contig15877, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39108

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
896--956
32
1.9
32
96
0
113
49
6
18
26
1.71
4664--5474
332
2.5
329
77
7
858
36
16
13
33
1.88
5494--6727
310
3.8
325
78
9
1180
36
16
14
33
1.88
6860--8391
330
4.7
329
75
9
1178
36
15
14
33
1.88
9612--9659
2
24.0
2
86
0
69
43
0
6
50
1.27
9730--9810
42
1.9
42
92
5
137
22
24
9
43
1.83
10121--10172
26
2.0
26
100
0
104
42
11
7
38
1.70
18838--18869
17
2.0
17
88
11
50
40
0
50
9
1.35

Tables:   1

The End!