Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015853.1 Corchorus olitorius cultivar O-4 contig15886, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5904

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
677--2193
761
2.0
756
92
2
2501
33
15
15
35
1.89
1735--2551
323
2.5
325
83
5
936
34
15
15
33
1.90
2439--2898
209
2.2
209
88
7
669
34
12
13
40
1.81
2812--3627
323
2.5
325
81
6
850
34
14
15
35
1.89
3722--5167
324
4.4
323
83
7
1779
33
15
16
34
1.90
2658--4558
886
2.2
885
89
3
2924
33
14
15
36
1.88
3754--5213
655
2.2
652
89
3
2202
33
14
16
35
1.90
4670--5904
552
2.2
557
91
2
1984
33
14
15
36
1.87

Tables:   1

The End!