Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015854.1 Corchorus olitorius cultivar O-4 contig15887, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37700

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2349--2381
2
16.5
2
100
0
66
48
0
0
51
1.00
5231--5315
30
2.8
29
77
8
89
32
20
5
41
1.76
5705--5919
112
1.9
109
94
4
378
32
17
7
41
1.78
7658--7686
15
1.9
15
100
0
58
44
0
0
55
0.99
24019--24062
1
44.0
1
81
0
52
90
2
6
0
0.51
24020--24062
13
3.3
13
87
6
61
90
2
6
0
0.52
32771--32837
34
2.0
34
93
0
116
20
23
19
35
1.95
32884--32923
20
2.0
20
100
0
80
55
5
25
15
1.60
33202--33362
78
2.1
78
95
0
286
34
13
0
50
1.46
33897--33943
23
2.0
23
87
8
67
12
8
27
51
1.69
37605--37642
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!