Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015864.1 Corchorus olitorius cultivar O-4 contig15897, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21966

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1397--1431
17
2.0
18
88
5
54
25
17
14
42
1.86
2644--3136
249
2.0
249
96
0
914
33
18
18
29
1.95
5966--6058
41
2.3
41
81
3
107
29
13
8
48
1.73
8713--8783
31
2.3
32
76
11
76
26
5
8
59
1.49
9035--9083
13
3.9
12
77
17
55
40
0
2
57
1.10
9257--9309
16
3.3
16
69
10
54
43
28
16
11
1.83
13172--13223
26
2.0
26
100
0
104
26
7
38
26
1.83
20415--20453
1
39.0
1
89
0
60
94
0
2
2
0.34

Tables:   1

The End!