Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015865.1 Corchorus olitorius cultivar O-4 contig15898, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24045

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1039--1064
11
2.4
11
100
0
52
38
7
0
53
1.30
6091--6260
89
1.9
88
98
1
331
27
17
29
26
1.97
7183--7225
9
4.7
9
83
13
52
53
0
13
32
1.41
8161--8205
21
2.1
21
84
8
56
17
35
11
35
1.86
10623--10726
52
2.0
52
98
0
199
24
13
27
34
1.93
10971--11044
37
2.0
37
100
0
148
16
10
35
37
1.83
13137--13171
15
2.3
16
90
9
56
17
14
25
42
1.86
14829--14912
31
2.8
29
83
7
98
26
23
15
34
1.95
15423--15447
13
1.9
13
100
0
50
60
0
0
40
0.97
15462--15538
30
2.5
31
85
6
104
24
29
16
28
1.97
18791--18870
31
2.6
30
86
7
101
35
12
23
28
1.91
20979--21050
23
3.0
23
71
15
74
48
8
26
16
1.74

Tables:   1

The End!