Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015877.1 Corchorus olitorius cultivar O-4 contig15910, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10220

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--496
16
4.8
16
76
6
84
9
11
38
40
1.73
504--544
16
2.5
17
76
15
50
4
14
36
43
1.67
1718--1743
12
2.2
12
100
0
52
11
7
34
46
1.69
2968--3018
19
2.7
19
77
14
61
50
1
0
47
1.12
3364--3389
13
2.0
13
100
0
52
53
30
0
15
1.42
8858--8897
15
2.6
16
92
4
64
12
10
12
65
1.49

Tables:   1

The End!