Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015887.1 Corchorus olitorius cultivar O-4 contig15920, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15179

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--86
25
2.2
25
87
6
76
78
1
10
8
1.03
1649--1799
76
2.0
76
82
7
182
16
29
29
24
1.97
9703--9752
25
2.0
24
84
3
64
56
0
0
44
0.99
9993--10208
37
5.8
37
81
0
225
27
14
37
19
1.91
9993--10206
74
2.9
74
83
2
268
28
14
38
19
1.91
9993--10203
111
1.9
111
81
0
253
28
14
37
18
1.91
12758--12829
35
2.1
35
91
0
117
36
15
15
33
1.89
14249--14293
20
2.4
19
81
7
56
46
20
8
24
1.78

Tables:   1

The End!