Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015908.1 Corchorus olitorius cultivar O-4 contig15941, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9591

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2814--2954
25
5.6
25
91
0
219
29
29
19
21
1.98
2814--2977
75
2.2
75
85
0
211
30
29
18
21
1.97
4392--4502
27
4.1
27
98
0
213
19
39
21
18
1.92
4546--4601
15
3.5
15
77
13
67
42
26
14
16
1.86
4546--4617
33
2.2
33
89
0
108
40
25
16
18
1.91
7226--7391
25
6.6
25
92
0
260
28
28
19
22
1.98
7256--7414
75
2.1
75
89
2
239
31
28
18
20
1.97

Tables:   1

The End!