Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015915.1 Corchorus olitorius cultivar O-4 contig15948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20618

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1476--1510
18
2.0
17
88
5
52
14
11
14
60
1.60
5514--5558
21
2.1
21
83
0
54
11
53
28
6
1.61
5799--5848
21
2.4
21
89
0
73
16
48
24
12
1.79
10313--10376
32
2.0
32
93
0
110
29
7
18
43
1.78
15326--15368
18
2.4
18
80
0
50
39
4
37
18
1.72
19194--19679
119
4.1
120
81
7
519
38
12
17
31
1.87
19221--19690
238
2.0
238
83
5
592
38
12
17
31
1.87
19253--19768
238
2.2
237
77
7
526
39
12
16
31
1.86

Tables:   1

The End!