Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015918.1 Corchorus olitorius cultivar O-4 contig15951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30831

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--242
27
2.0
27
92
0
88
47
9
13
30
1.74
400--450
24
2.3
22
81
15
68
33
11
3
50
1.57
1471--1511
2
20.0
2
95
5
73
48
2
0
48
1.14
2837--3051
106
2.0
106
97
0
403
25
27
18
28
1.98
18505--18575
27
2.6
27
97
0
133
14
18
29
38
1.90
26820--26859
21
2.1
19
86
13
55
25
27
15
32
1.95
27317--27356
21
1.9
21
84
0
53
35
15
27
22
1.94

Tables:   1

The End!