Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015922.1 Corchorus olitorius cultivar O-4 contig15955, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37905

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1401--1437
17
2.2
17
95
0
65
70
5
24
0
1.08
1967--2010
23
1.9
23
85
0
61
43
15
6
34
1.74
8185--8233
24
2.2
22
76
16
55
46
14
8
30
1.73
8193--8254
24
2.6
24
97
2
117
46
12
8
32
1.71
11915--12011
48
2.0
49
91
2
160
46
10
10
32
1.72
27589--27647
29
2.0
29
86
0
82
40
10
6
42
1.65
27594--27655
29
2.1
29
81
0
70
38
9
8
43
1.67
32905--32953
21
2.3
21
82
6
55
40
16
28
14
1.87
35791--35822
16
2.0
16
100
0
64
18
37
12
31
1.88

Tables:   1

The End!