Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015923.1 Corchorus olitorius cultivar O-4 contig15956, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27343

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4106--4190
27
3.1
27
89
1
134
32
23
25
17
1.97
6274--6325
3
17.3
3
100
0
104
67
0
0
32
0.91
11979--12023
17
2.5
17
85
7
54
55
2
26
15
1.52
12791--12836
17
2.8
16
87
9
65
4
41
8
45
1.55
15980--16030
2
25.5
2
91
0
84
49
1
1
47
1.24
23907--23948
6
7.0
6
94
0
57
80
7
0
11
0.88
24262--24302
21
1.9
22
85
5
57
43
29
17
9
1.80
24482--24565
31
2.7
31
78
7
82
33
29
20
16
1.95
25940--25990
17
3.0
17
82
5
59
23
49
23
3
1.67
25936--25990
23
2.4
23
84
0
74
23
47
25
3
1.68

Tables:   1

The End!