Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015927.1 Corchorus olitorius cultivar O-4 contig15960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31248

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1985--2014
15
2.0
15
93
0
51
30
26
10
33
1.89
7291--7561
36
7.6
35
88
5
375
36
16
15
30
1.90
7247--7561
143
2.2
145
86
6
426
37
17
15
30
1.91
7247--7561
106
2.9
107
85
5
393
37
17
15
30
1.91
7518--7640
52
2.4
52
91
0
201
39
11
15
33
1.83
10831--10892
31
2.0
31
100
0
124
35
12
22
29
1.91
17273--17310
16
2.5
15
87
12
51
73
0
18
7
1.06
20378--20411
17
2.1
16
94
5
59
32
5
8
52
1.56
24056--24553
30
16.6
30
85
6
652
20
14
18
47
1.83
24140--24189
24
2.1
24
88
0
73
18
16
24
42
1.89
24995--25071
28
2.8
27
75
13
68
16
10
28
44
1.81
29705--29875
35
4.8
35
74
9
150
41
19
19
19
1.91
29667--29885
71
3.2
68
78
12
216
42
18
19
19
1.89
29896--30119
37
6.4
37
74
12
150
41
19
19
19
1.91
30007--30073
35
1.9
35
87
0
98
37
22
25
14
1.93
30044--30106
31
2.1
31
87
3
92
44
20
20
14
1.86

Tables:   1

The End!