Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015931.1 Corchorus olitorius cultivar O-4 contig15964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35485

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--55
21
2.3
21
82
6
55
14
28
16
40
1.87
4498--4840
72
4.8
72
90
1
528
21
27
20
30
1.98
6022--6163
43
3.4
42
90
3
223
40
27
10
21
1.86
6248--6303
29
2.0
28
89
3
85
39
19
10
30
1.86
18505--18579
34
2.4
31
78
10
82
45
12
2
40
1.55
24309--24646
166
2.0
169
92
3
567
27
21
13
37
1.91
31458--31487
8
3.8
8
95
0
51
0
13
0
86
0.57
32479--32514
17
2.1
17
100
0
72
58
22
5
13
1.56
34650--34710
29
2.1
30
87
3
88
50
3
3
42
1.34

Tables:   1

The End!