Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015932.1 Corchorus olitorius cultivar O-4 contig15965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28952

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4832--4914
3
27.3
3
97
2
157
66
0
0
33
0.92
7139--7229
42
2.2
42
90
2
139
35
4
19
40
1.72
7644--7748
53
2.0
53
98
0
201
46
13
12
27
1.79
8583--8681
51
1.9
51
89
4
155
10
29
2
58
1.42
10098--10140
20
2.1
20
82
4
50
53
0
18
27
1.45
16419--16460
20
2.1
20
91
8
68
11
7
4
76
1.15
16422--16467
19
2.5
19
82
10
60
15
4
4
76
1.11
19596--19633
16
2.4
16
100
0
76
0
31
18
50
1.47
20864--20927
32
2.0
32
96
0
119
37
26
3
32
1.72
21753--21790
18
2.2
17
86
9
51
39
2
2
55
1.28

Tables:   1

The End!