Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015935.1 Corchorus olitorius cultivar O-4 contig15968, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33241

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12152--12305
51
3.0
51
98
0
290
33
5
25
35
1.78
14208--14288
39
2.1
39
100
0
162
58
0
19
22
1.40
17498--17524
1
27.0
1
100
0
54
0
0
0
100
0.00
20369--20402
17
2.0
17
100
0
68
64
5
11
17
1.45
30234--30396
84
1.9
84
86
2
229
38
16
12
32
1.87
31728--31848
42
2.8
45
83
12
178
34
8
23
33
1.84
33164--33241
2
39.0
2
100
0
156
50
0
50
0
1.00

Tables:   1

The End!