Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015953.1 Corchorus olitorius cultivar O-4 contig15986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10461

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1261--1314
27
2.0
27
100
0
108
40
7
11
40
1.69
1263--1308
15
3.3
15
70
17
53
39
8
8
43
1.66
1271--1318
12
3.8
12
74
15
51
39
4
10
45
1.58
1438--1479
15
2.7
15
88
3
57
14
9
14
61
1.55
7759--7799
21
2.0
21
85
9
57
34
9
26
29
1.88
9660--9695
5
7.8
5
82
17
51
77
22
0
0
0.76
9656--9695
9
4.6
9
96
3
73
77
22
0
0
0.77

Tables:   1

The End!