Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015956.1 Corchorus olitorius cultivar O-4 contig15989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10441

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1957--2051
42
2.3
42
87
8
133
24
24
10
41
1.86
3696--3733
19
1.9
19
89
5
58
73
10
0
15
1.09
4323--4470
50
3.0
50
87
4
208
31
16
14
37
1.89
4954--5166
35
6.1
35
90
5
315
30
19
20
30
1.97
4966--5164
105
1.9
105
94
2
355
29
20
21
29
1.98
5458--5532
29
2.6
28
87
4
114
17
16
24
42
1.88
7951--8079
41
3.1
41
93
0
204
25
15
11
47
1.79

Tables:   1

The End!