Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015962.1 Corchorus olitorius cultivar O-4 contig15995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12549

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
755--829
28
2.7
28
81
2
89
38
9
22
29
1.85
1723--1777
23
2.4
23
77
14
60
5
40
41
12
1.66
1772--1829
25
2.3
25
100
0
116
3
29
37
29
1.74
2958--2988
14
2.1
15
94
5
55
48
12
0
38
1.42
4304--4335
2
16.0
2
100
0
64
50
50
0
0
1.00
8601--8633
17
1.9
18
88
11
52
9
9
0
81
0.87
12128--12171
21
2.1
22
79
12
56
31
18
20
29
1.96

Tables:   1

The End!