Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01015973.1 Corchorus olitorius cultivar O-4 contig16006, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8487

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2125--2165
2
21.0
2
95
5
75
48
0
0
51
1.00
2907--2996
22
4.1
22
72
17
64
38
16
6
37
1.75
2919--3247
22
15.1
22
65
19
120
36
15
11
35
1.84
5274--5341
29
2.3
29
87
5
93
19
22
16
42
1.89
7671--7712
15
2.7
15
96
3
75
11
7
14
66
1.43
8184--8290
55
1.9
55
86
3
153
28
5
14
51
1.64
8352--8455
25
3.9
26
70
20
81
35
9
13
41
1.77

Tables:   1

The End!